diff --git a/meson.build b/meson.build
index 65ea45cef0..e4b2af138d 100644
--- a/meson.build
+++ b/meson.build
@@ -2831,7 +2831,7 @@ config_host_data.set('CONFIG_ATOMIC64', cc.links('''
     __atomic_exchange_n(&x, y, __ATOMIC_RELAXED);
     __atomic_fetch_add(&x, y, __ATOMIC_RELAXED);
     return 0;
-  }'''))
+  }''', args: qemu_isa_flags))
 
 has_int128_type = cc.compiles('''
   __int128_t a;
@@ -2865,7 +2865,7 @@ if has_int128_type
       __atomic_compare_exchange_n(&p[4], &p[5], p[6], 0, __ATOMIC_RELAXED, __ATOMIC_RELAXED);
       return 0;
     }'''
-  has_atomic128 = cc.links(atomic_test_128)
+  has_atomic128 = cc.links(atomic_test_128, args: qemu_isa_flags)
 
   config_host_data.set('CONFIG_ATOMIC128', has_atomic128)
 
@@ -2874,7 +2874,8 @@ if has_int128_type
     # without optimization enabled.  Try again with optimizations locally
     # enabled for the function.  See
     #   https://gcc.gnu.org/bugzilla/show_bug.cgi?id=107389
-    has_atomic128_opt = cc.links('__attribute__((optimize("O1")))' + atomic_test_128)
+    has_atomic128_opt = cc.links('__attribute__((optimize("O1")))' + atomic_test_128,
+                                 args: qemu_isa_flags)
     config_host_data.set('CONFIG_ATOMIC128_OPT', has_atomic128_opt)
 
     if not has_atomic128_opt
@@ -2885,7 +2886,7 @@ if has_int128_type
           __sync_val_compare_and_swap_16(&x, y, x);
           return 0;
         }
-      '''))
+      ''', args: qemu_isa_flags))
     endif
   endif
 endif