diff --git a/Source/Core/VideoBackends/Vulkan/CommandBufferManager.cpp b/Source/Core/VideoBackends/Vulkan/CommandBufferManager.cpp
index 5d70d38584..4b13320476 100644
--- a/Source/Core/VideoBackends/Vulkan/CommandBufferManager.cpp
+++ b/Source/Core/VideoBackends/Vulkan/CommandBufferManager.cpp
@@ -377,9 +377,6 @@ void CommandBufferManager::OnCommandBufferExecuted(size_t index)
     backup_iter->second.second(resources.fence);
   }
 
-  for (const auto& iter : m_fence_point_callbacks)
-    iter.second.second(resources.fence);
-
   // Clean up all objects pending destruction on this command buffer
   for (auto& it : resources.cleanup_resources)
     it();
diff --git a/Source/Core/VideoBackends/Vulkan/Texture2D.cpp b/Source/Core/VideoBackends/Vulkan/Texture2D.cpp
index 9b8111aa94..a15f8f8d04 100644
--- a/Source/Core/VideoBackends/Vulkan/Texture2D.cpp
+++ b/Source/Core/VideoBackends/Vulkan/Texture2D.cpp
@@ -202,7 +202,8 @@ void Texture2D::TransitionToLayout(VkCommandBuffer command_buffer, VkImageLayout
     // Image was being used as a depthstencil attachment, so ensure all writes have completed.
     barrier.srcAccessMask =
         VK_ACCESS_DEPTH_STENCIL_ATTACHMENT_READ_BIT | VK_ACCESS_DEPTH_STENCIL_ATTACHMENT_WRITE_BIT;
-    srcStageMask = VK_PIPELINE_STAGE_COLOR_ATTACHMENT_OUTPUT_BIT;
+    srcStageMask =
+        VK_PIPELINE_STAGE_EARLY_FRAGMENT_TESTS_BIT | VK_PIPELINE_STAGE_LATE_FRAGMENT_TESTS_BIT;
     break;
 
   case VK_IMAGE_LAYOUT_SHADER_READ_ONLY_OPTIMAL:
@@ -238,19 +239,19 @@ void Texture2D::TransitionToLayout(VkCommandBuffer command_buffer, VkImageLayout
   case VK_IMAGE_LAYOUT_COLOR_ATTACHMENT_OPTIMAL:
     barrier.dstAccessMask =
         VK_ACCESS_COLOR_ATTACHMENT_READ_BIT | VK_ACCESS_COLOR_ATTACHMENT_WRITE_BIT;
-    dstStageMask = VK_PIPELINE_STAGE_TOP_OF_PIPE_BIT;
+    dstStageMask = VK_PIPELINE_STAGE_COLOR_ATTACHMENT_OUTPUT_BIT;
     break;
 
   case VK_IMAGE_LAYOUT_DEPTH_STENCIL_ATTACHMENT_OPTIMAL:
     barrier.dstAccessMask =
         VK_ACCESS_DEPTH_STENCIL_ATTACHMENT_READ_BIT | VK_ACCESS_DEPTH_STENCIL_ATTACHMENT_WRITE_BIT;
-    dstStageMask = VK_PIPELINE_STAGE_TOP_OF_PIPE_BIT;
+    dstStageMask =
+        VK_PIPELINE_STAGE_EARLY_FRAGMENT_TESTS_BIT | VK_PIPELINE_STAGE_LATE_FRAGMENT_TESTS_BIT;
     break;
 
   case VK_IMAGE_LAYOUT_SHADER_READ_ONLY_OPTIMAL:
-    // TODO: Can we use FRAGMENT_SHADER here? We don't sample textures in the earlier stages.
     barrier.dstAccessMask = VK_ACCESS_SHADER_READ_BIT;
-    dstStageMask = VK_PIPELINE_STAGE_TOP_OF_PIPE_BIT;
+    dstStageMask = VK_PIPELINE_STAGE_FRAGMENT_SHADER_BIT;
     break;
 
   case VK_IMAGE_LAYOUT_TRANSFER_SRC_OPTIMAL:
@@ -264,7 +265,6 @@ void Texture2D::TransitionToLayout(VkCommandBuffer command_buffer, VkImageLayout
     break;
 
   case VK_IMAGE_LAYOUT_PRESENT_SRC_KHR:
-    barrier.dstAccessMask = VK_ACCESS_MEMORY_READ_BIT;
     srcStageMask = VK_PIPELINE_STAGE_ALL_COMMANDS_BIT;
     dstStageMask = VK_PIPELINE_STAGE_BOTTOM_OF_PIPE_BIT;
     break;
@@ -347,7 +347,8 @@ void Texture2D::TransitionToLayout(VkCommandBuffer command_buffer, ComputeImageL
     // Image was being used as a depthstencil attachment, so ensure all writes have completed.
     barrier.srcAccessMask =
         VK_ACCESS_DEPTH_STENCIL_ATTACHMENT_READ_BIT | VK_ACCESS_DEPTH_STENCIL_ATTACHMENT_WRITE_BIT;
-    srcStageMask = VK_PIPELINE_STAGE_COLOR_ATTACHMENT_OUTPUT_BIT;
+    srcStageMask =
+        VK_PIPELINE_STAGE_EARLY_FRAGMENT_TESTS_BIT | VK_PIPELINE_STAGE_LATE_FRAGMENT_TESTS_BIT;
     break;
 
   case VK_IMAGE_LAYOUT_SHADER_READ_ONLY_OPTIMAL:
diff --git a/Source/Core/VideoBackends/Vulkan/VKTexture.cpp b/Source/Core/VideoBackends/Vulkan/VKTexture.cpp
index 0edaec8a63..4a4f70c2cb 100644
--- a/Source/Core/VideoBackends/Vulkan/VKTexture.cpp
+++ b/Source/Core/VideoBackends/Vulkan/VKTexture.cpp
@@ -497,6 +497,7 @@ void VKStagingTexture::Flush()
   {
     // WaitForFence should fire the callback.
     g_command_buffer_mgr->WaitForFence(m_flush_fence);
+    m_flush_fence = VK_NULL_HANDLE;
   }
   else
   {