diff --git a/Source/Core/Core/BootManager.cpp b/Source/Core/Core/BootManager.cpp
index eeeccee467..9d524f7df3 100644
--- a/Source/Core/Core/BootManager.cpp
+++ b/Source/Core/Core/BootManager.cpp
@@ -390,12 +390,6 @@ bool BootCore(std::unique_ptr<BootParameters> boot)
   return Core::Init(std::move(boot));
 }
 
-void Stop()
-{
-  Core::Stop();
-  RestoreConfig();
-}
-
 // SYSCONF can be modified during emulation by the user and internally, which makes it
 // a bad idea to just always overwrite it with the settings from the base layer.
 //
diff --git a/Source/Core/Core/BootManager.h b/Source/Core/Core/BootManager.h
index a068247e50..b89dfac324 100644
--- a/Source/Core/Core/BootManager.h
+++ b/Source/Core/Core/BootManager.h
@@ -15,8 +15,6 @@ namespace BootManager
 {
 bool BootCore(std::unique_ptr<BootParameters> parameters);
 
-// Stop the emulation core and restore the configuration.
-void Stop();
 // Synchronise Dolphin's configuration with the SYSCONF (which may have changed during emulation),
 // and restore settings that were overriden by per-game INIs or for some other reason.
 void RestoreConfig();
diff --git a/Source/Core/DolphinQt2/Main.cpp b/Source/Core/DolphinQt2/Main.cpp
index c3c62ca06f..cce233098a 100644
--- a/Source/Core/DolphinQt2/Main.cpp
+++ b/Source/Core/DolphinQt2/Main.cpp
@@ -220,7 +220,6 @@ int main(int argc, char* argv[])
     retval = app.exec();
   }
 
-  BootManager::Stop();
   Core::Shutdown();
   UICommon::Shutdown();
   Host::GetInstance()->deleteLater();